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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015878223.1_cds_XP_016436715.1_32535
CDS Infomation

[gene=LOC107762830] [db_xref=GeneID:107762830] [protein=probable glycosyltransferase At3g42180] [protein_id=XP_016436715.1] [location=complement(join(126531..127199,127303..127684,127868..128019,128125..128289))] [gbkey=CDS]
Sequence

ATGTCTGCTTCAAGCTGCAGTGCTCCATTGTTAATATTTCCAGCCTTTGTATTTCTTCTC
TTGGTCTACTTCTCCCAACTAAATCATTTCTCTTTCTCAAAAACACCTCCCTTAAACTAC
AAAATCTTACATGACAATCAACAAGTAGTCCTCAATTCTGCTAAGAAGAGCAGTGTACAG
AAAATTGAAGAAGATTTAGCCAGAGCAAGAGCAGCAATTCGGCGAGCTATTCGTTCGAAA
AACTATACTTCTTATAAAGAAGATGAGAGGTTCATTCCAAGTGGTTCTATGTATAGAAAC
TCATATGCCTTTCACCAGAGTTACATAGAGATGATGAAGAGATTTAAGGTGTGGACATAC
AAGGAAGGAGATTTACCAATGGTACACAATGGACCCATGAAAGAGATATATGCAATAGAA
GGTCACTTCATTGGTGAAATGGAGAGTGAAAATGAAATGGAGAGTGAAAAAGCAAGACCT
AATTTCTTGGCTTCCCATCCTGATCAAGCTCATGCCTTCTTTATACCAATCAGTGTTGCC
TATATTGTTCAATTTCTTTTCATTCCAGGCACCAATCATATTTTTCGAGCTAAGTTGCAA
AGGGTGGTTGAGGATTACATTCATGTCATTGCTAACAAGTATCCTTATTGGAATAGAAGC
AATGGTGCTGATCATTTCATTCTTTCTTGCCATGATTGGGCACCAGAGATTTCCAGTGGA
AATCCAAGGCTGTTCAACAACTTGATCAGAGTGTTATGCAATGCGAATACCTCAGAAGGA
TTTCAACCCAAAAGAGACATCTCATTGCCTGAGGTTTATGGATTAGCCAACACTCTTAAT
CTTGCACCCCCAGACTTAGGTTTACACCCAACCAATCGCCCCATTCTTGCATTCTTTGCT
GGTGGAGCACACGGCTACATAAGAAAAAAATTGCTTCAACATTGGAAAGGCAAAGACCAC
GAAATTCGCGTCCACGAGTACCTCCCAGAGGGTCAAAATTACACATATTTAATGGGTCAA
ACCAAGTTTTGCTTAGCTCCAAGTGGATATGAAGTTGCAAGTCCAAGAGTCACCGAAGCA
ATTTATGCAGGATGCATTCCTGTCATAATTTCAGATCACTATTCCTTGCCATTTAGTGAT
GTTCTTGACTGGAGTCAATTTTCCATTAGTGTTCCAGTTGACAAAATCCCTGAATTAAAG
ACAATCTTGAAAGGTGTTTCTCGTGGTAAGTACTTGAAAATGCAGAAAAGAGTGAGAAGA
TTGCAAAGGCATTTCAAAGTGCACCGGCCAGCTCAGCCCTATGATGCAATCTACACTGTG
CTTCACTCAGTGTGGTTAAGGCGACTCAATCTTAGACTAGCTACTTGA

Peptide Sequence

PEP ID

XP_016436715.1
PEP Infomation

PREDICTED: probable glycosyltransferase At3g42180 [Nicotiana tabacum]
Sequence

MSASSCSAPLLIFPAFVFLLLVYFSQLNHFSFSKTPPLNYKILHDNQQVVLNSAKKSSVQ
KIEEDLARARAAIRRAIRSKNYTSYKEDERFIPSGSMYRNSYAFHQSYIEMMKRFKVWTY
KEGDLPMVHNGPMKEIYAIEGHFIGEMESENEMESEKARPNFLASHPDQAHAFFIPISVA
YIVQFLFIPGTNHIFRAKLQRVVEDYIHVIANKYPYWNRSNGADHFILSCHDWAPEISSG
NPRLFNNLIRVLCNANTSEGFQPKRDISLPEVYGLANTLNLAPPDLGLHPTNRPILAFFA
GGAHGYIRKKLLQHWKGKDHEIRVHEYLPEGQNYTYLMGQTKFCLAPSGYEVASPRVTEA
IYAGCIPVIISDHYSLPFSDVLDWSQFSISVPVDKIPELKTILKGVSRGKYLKMQKRVRR
LQRHFKVHRPAQPYDAIYTVLHSVWLRRLNLRLAT

Transcript Sequence

Gene sequence data has not been registered.